Cluster: HRGMv2_2447_CGC20
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2447
- CGC Family ID: CGCFAM_10085
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2447_51 | HRGMv2_2447_51_1 | 60 | 932 | - | CE4 |
| pfam | HRGMv2_2447_51 | HRGMv2_2447_51_2 | 1192 | 1986 | + | Hydrolase | S6PP | Hydrolase_3 |
| TF | HRGMv2_2447_51 | HRGMv2_2447_51_3 | 2228 | 3028 | + | MerR |
| TC | HRGMv2_2447_51 | HRGMv2_2447_51_4 | 3025 | 3837 | + | 3.A.1.142.2 |
Gene ID: HRGMv2_2447_51_1
Type: CAZyme
Location: 60 - 932 (-)
Type: CAZyme
Location: 60 - 932 (-)
Gene ID: HRGMv2_2447_51_2
Type: pfam
Location: 1192 - 1986 (+)
Type: pfam
Location: 1192 - 1986 (+)
Gene ID: HRGMv2_2447_51_3
Type: TF
Location: 2228 - 3028 (+)
Type: TF
Location: 2228 - 3028 (+)
Gene ID: HRGMv2_2447_51_4
Type: TC
Location: 3025 - 3837 (+)
Type: TC
Location: 3025 - 3837 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Mediterraneibacter
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.