Cluster: HRGMv2_2447_CGC18
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2447
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2447_48 | HRGMv2_2447_48_1 | 105 | 2222 | - | GH13_11 |
| TF | HRGMv2_2447_48 | HRGMv2_2447_48_2 | 2245 | 2871 | - | GerE |
| STP | HRGMv2_2447_48 | HRGMv2_2447_48_3 | 2849 | 3949 | - | HATPase_c |
| TC | HRGMv2_2447_48 | HRGMv2_2447_48_4 | 4166 | 5095 | + | 3.A.1.105.7 |
Gene ID: HRGMv2_2447_48_1
Type: CAZyme
Location: 105 - 2222 (-)
Type: CAZyme
Location: 105 - 2222 (-)
Gene ID: HRGMv2_2447_48_2
Type: TF
Location: 2245 - 2871 (-)
Type: TF
Location: 2245 - 2871 (-)
Gene ID: HRGMv2_2447_48_3
Type: STP
Location: 2849 - 3949 (-)
Type: STP
Location: 2849 - 3949 (-)
Gene ID: HRGMv2_2447_48_4
Type: TC
Location: 4166 - 5095 (+)
Type: TC
Location: 4166 - 5095 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Mediterraneibacter
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.