Cluster: HRGMv2_2447_CGC13
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_2447
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2447_36 | HRGMv2_2447_36_22 | 28538 | 30424 | - | 3.D.1.5.1 |
| TC | HRGMv2_2447_36 | HRGMv2_2447_36_23 | 30429 | 30902 | - | 3.D.1.5.1 |
| pfam | HRGMv2_2447_36 | HRGMv2_2447_36_24 | 31154 | 31984 | - | Amidase_3 |
| CAZyme | HRGMv2_2447_36 | HRGMv2_2447_36_25 | 32151 | 32960 | + | GH25 |
| pfam | HRGMv2_2447_36 | HRGMv2_2447_36_26 | 33311 | 35356 | - | Zn_Ribbon_1 | TPR_19 | WG_beta_rep | WG_beta_rep | WG_beta_rep | WG_beta_rep |
| pfam | HRGMv2_2447_36 | HRGMv2_2447_36_27 | 35886 | 36947 | + | Zn_Ribbon_1 |
| CAZyme | HRGMv2_2447_36 | HRGMv2_2447_36_28 | 36950 | 37870 | + | GH25 |
Gene ID: HRGMv2_2447_36_22
Type: TC
Location: 28538 - 30424 (-)
Type: TC
Location: 28538 - 30424 (-)
Gene ID: HRGMv2_2447_36_23
Type: TC
Location: 30429 - 30902 (-)
Type: TC
Location: 30429 - 30902 (-)
Gene ID: HRGMv2_2447_36_24
Type: pfam
Location: 31154 - 31984 (-)
Type: pfam
Location: 31154 - 31984 (-)
Gene ID: HRGMv2_2447_36_25
Type: CAZyme
Location: 32151 - 32960 (+)
Type: CAZyme
Location: 32151 - 32960 (+)
Gene ID: HRGMv2_2447_36_26
Type: pfam
Location: 33311 - 35356 (-)
Type: pfam
Location: 33311 - 35356 (-)
Gene ID: HRGMv2_2447_36_27
Type: pfam
Location: 35886 - 36947 (+)
Type: pfam
Location: 35886 - 36947 (+)
Gene ID: HRGMv2_2447_36_28
Type: CAZyme
Location: 36950 - 37870 (+)
Type: CAZyme
Location: 36950 - 37870 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Mediterraneibacter
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.