Cluster: HRGMv2_2447_CGC12
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2447
- CGC Family ID: CGCFAM_10042
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2447_33 | HRGMv2_2447_33_97 | 106116 | 108176 | - | 9.B.10.1.1 |
| CAZyme | HRGMv2_2447_33 | HRGMv2_2447_33_98 | 108211 | 109848 | - | GH25 |
| pfam | HRGMv2_2447_33 | HRGMv2_2447_33_99 | 109996 | 111528 | - | LytR_cpsA_psr |
| pfam | HRGMv2_2447_33 | HRGMv2_2447_33_100 | 111559 | 112476 | - | NTP_transferase | NTP_transf_3 |
| TC | HRGMv2_2447_33 | HRGMv2_2447_33_101 | 112493 | 112768 | - | 8.A.8.1.6 |
Gene ID: HRGMv2_2447_33_97
Type: TC
Location: 106116 - 108176 (-)
Type: TC
Location: 106116 - 108176 (-)
Gene ID: HRGMv2_2447_33_98
Type: CAZyme
Location: 108211 - 109848 (-)
Type: CAZyme
Location: 108211 - 109848 (-)
Gene ID: HRGMv2_2447_33_99
Type: pfam
Location: 109996 - 111528 (-)
Type: pfam
Location: 109996 - 111528 (-)
Gene ID: HRGMv2_2447_33_100
Type: pfam
Location: 111559 - 112476 (-)
Type: pfam
Location: 111559 - 112476 (-)
Gene ID: HRGMv2_2447_33_101
Type: TC
Location: 112493 - 112768 (-)
Type: TC
Location: 112493 - 112768 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Mediterraneibacter
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.