Cluster: HRGMv2_2447_CGC1
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2447
- CGC Family ID: CGCFAM_00156
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2447_2 | HRGMv2_2447_2_55 | 58484 | 60316 | - | 3.A.1.120.6 |
| TC | HRGMv2_2447_2 | HRGMv2_2447_2_56 | 60399 | 61751 | - | 2.A.66.1.32 |
| TC | HRGMv2_2447_2 | HRGMv2_2447_2_57 | 61878 | 62948 | - | 4.D.2.1.5 |
| NULL(UNKNOWN) | HRGMv2_2447_2 | HRGMv2_2447_2_58 | 62938 | 63558 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_2447_2 | HRGMv2_2447_2_59 | 63584 | 64624 | - | GT2 |
Gene ID: HRGMv2_2447_2_55
Type: TC
Location: 58484 - 60316 (-)
Type: TC
Location: 58484 - 60316 (-)
Gene ID: HRGMv2_2447_2_56
Type: TC
Location: 60399 - 61751 (-)
Type: TC
Location: 60399 - 61751 (-)
Gene ID: HRGMv2_2447_2_57
Type: TC
Location: 61878 - 62948 (-)
Type: TC
Location: 61878 - 62948 (-)
Gene ID: HRGMv2_2447_2_58
Type:
Location: 62938 - 63558 (-)
Type:
Location: 62938 - 63558 (-)
Gene ID: HRGMv2_2447_2_59
Type: CAZyme
Location: 63584 - 64624 (-)
Type: CAZyme
Location: 63584 - 64624 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Mediterraneibacter
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.