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Cluster: HRGMv2_2445_CGC9

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2445_4 HRGMv2_2445_4_146 156166 156963 - 2.A.5.5.2
NULL(UNKNOWN) HRGMv2_2445_4 HRGMv2_2445_4_147 157326 157427 - NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_2445_4 HRGMv2_2445_4_148 158153 160750 + 3.A.3.2.21
TC HRGMv2_2445_4 HRGMv2_2445_4_149 160852 162111 + 2.A.23.1.5
TC HRGMv2_2445_4 HRGMv2_2445_4_150 162670 164040 - 2.A.66.1.32
STP HRGMv2_2445_4 HRGMv2_2445_4_151 164421 165398 + PALP
NULL(UNKNOWN) HRGMv2_2445_4 HRGMv2_2445_4_152 165701 165862 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_2445_4 HRGMv2_2445_4_153 166311 167249 + CE4
TC HRGMv2_2445_4 HRGMv2_2445_4_154 167649 168356 + 2.A.78.1.1
TC HRGMv2_2445_4 HRGMv2_2445_4_155 168356 168682 + 2.A.78.1.1
Gene ID: HRGMv2_2445_4_146
Type: TC
Location: 156166 - 156963 (-)
Gene ID: HRGMv2_2445_4_147
Type:
Location: 157326 - 157427 (-)
Gene ID: HRGMv2_2445_4_148
Type: TC
Location: 158153 - 160750 (+)
Gene ID: HRGMv2_2445_4_149
Type: TC
Location: 160852 - 162111 (+)
Gene ID: HRGMv2_2445_4_150
Type: TC
Location: 162670 - 164040 (-)
Gene ID: HRGMv2_2445_4_151
Type: STP
Location: 164421 - 165398 (+)
Gene ID: HRGMv2_2445_4_152
Type:
Location: 165701 - 165862 (+)
Gene ID: HRGMv2_2445_4_153
Type: CAZyme
Location: 166311 - 167249 (+)
Gene ID: HRGMv2_2445_4_154
Type: TC
Location: 167649 - 168356 (+)
Gene ID: HRGMv2_2445_4_155
Type: TC
Location: 168356 - 168682 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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