Cluster: HRGMv2_2445_CGC3
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2445
- CGC Family ID: CGCFAM_05017
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2445_1 | HRGMv2_2445_1_181 | 207500 | 208243 | - | 9.B.198.1.4 |
| pfam | HRGMv2_2445_1 | HRGMv2_2445_1_182 | 208243 | 209244 | - | PseudoU_synth_2 |
| pfam | HRGMv2_2445_1 | HRGMv2_2445_1_183 | 209260 | 210216 | - | RF-1 | PCRF |
| TC | HRGMv2_2445_1 | HRGMv2_2445_1_184 | 210765 | 213338 | - | 3.A.5.1.3 |
| NULL(UNKNOWN) | HRGMv2_2445_1 | HRGMv2_2445_1_185 | 213699 | 214118 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_2445_1 | HRGMv2_2445_1_186 | 214237 | 215808 | + | GH77 |
Gene ID: HRGMv2_2445_1_181
Type: TC
Location: 207500 - 208243 (-)
Type: TC
Location: 207500 - 208243 (-)
Gene ID: HRGMv2_2445_1_182
Type: pfam
Location: 208243 - 209244 (-)
Type: pfam
Location: 208243 - 209244 (-)
Gene ID: HRGMv2_2445_1_183
Type: pfam
Location: 209260 - 210216 (-)
Type: pfam
Location: 209260 - 210216 (-)
Gene ID: HRGMv2_2445_1_184
Type: TC
Location: 210765 - 213338 (-)
Type: TC
Location: 210765 - 213338 (-)
Gene ID: HRGMv2_2445_1_185
Type:
Location: 213699 - 214118 (-)
Type:
Location: 213699 - 214118 (-)
Gene ID: HRGMv2_2445_1_186
Type: CAZyme
Location: 214237 - 215808 (+)
Type: CAZyme
Location: 214237 - 215808 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Anaerotignaceae
Genus
JANFXS01
Species
JANFXS01 sp024460105
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.