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Cluster: HRGMv2_2445_CGC2

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2445_1 HRGMv2_2445_1_140 158416 160857 - 3.A.9.1.2
pfam HRGMv2_2445_1 HRGMv2_2445_1_141 161027 162064 - ATP-gua_Ptrans
pfam HRGMv2_2445_1 HRGMv2_2445_1_142 162068 162571 - UVR
TC HRGMv2_2445_1 HRGMv2_2445_1_143 162921 164165 - 5.A.1.2.7
pfam HRGMv2_2445_1 HRGMv2_2445_1_144 164323 164997 - PseudoU_synth_2
CAZyme HRGMv2_2445_1 HRGMv2_2445_1_145 164984 167062 - GH13_39
pfam HRGMv2_2445_1 HRGMv2_2445_1_146 167698 168291 - BofC_C
TC HRGMv2_2445_1 HRGMv2_2445_1_147 168623 170239 - 2.A.66.2.14
Gene ID: HRGMv2_2445_1_140
Type: TC
Location: 158416 - 160857 (-)
Gene ID: HRGMv2_2445_1_141
Type: pfam
Location: 161027 - 162064 (-)
Gene ID: HRGMv2_2445_1_142
Type: pfam
Location: 162068 - 162571 (-)
Gene ID: HRGMv2_2445_1_143
Type: TC
Location: 162921 - 164165 (-)
Gene ID: HRGMv2_2445_1_144
Type: pfam
Location: 164323 - 164997 (-)
Gene ID: HRGMv2_2445_1_145
Type: CAZyme
Location: 164984 - 167062 (-)
Gene ID: HRGMv2_2445_1_146
Type: pfam
Location: 167698 - 168291 (-)
Gene ID: HRGMv2_2445_1_147
Type: TC
Location: 168623 - 170239 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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