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Cluster: HRGMv2_2445_CGC15

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_2445_12 HRGMv2_2445_12_45 49901 50833 + GT2
pfam HRGMv2_2445_12 HRGMv2_2445_12_46 50921 53623 + YfhO
pfam HRGMv2_2445_12 HRGMv2_2445_12_47 54561 56246 + ILVD_EDD_N | ILV_EDD_C
TC HRGMv2_2445_12 HRGMv2_2445_12_48 56270 57694 + 2.A.8.1.4
TF HRGMv2_2445_12 HRGMv2_2445_12_49 57968 58639 - GntR
pfam HRGMv2_2445_12 HRGMv2_2445_12_50 59312 59965 + DUF4397 | DUF4397
CAZyme HRGMv2_2445_12 HRGMv2_2445_12_51 60295 61581 + GH18
pfam HRGMv2_2445_12 HRGMv2_2445_12_52 61647 62387 + adh_short | DUF1776 | KR | adh_short_C2
CAZyme HRGMv2_2445_12 HRGMv2_2445_12_53 63397 64164 + GH25
Gene ID: HRGMv2_2445_12_45
Type: CAZyme
Location: 49901 - 50833 (+)
Gene ID: HRGMv2_2445_12_46
Type: pfam
Location: 50921 - 53623 (+)
Gene ID: HRGMv2_2445_12_47
Type: pfam
Location: 54561 - 56246 (+)
Gene ID: HRGMv2_2445_12_48
Type: TC
Location: 56270 - 57694 (+)
Gene ID: HRGMv2_2445_12_49
Type: TF
Location: 57968 - 58639 (-)
Gene ID: HRGMv2_2445_12_50
Type: pfam
Location: 59312 - 59965 (+)
Gene ID: HRGMv2_2445_12_51
Type: CAZyme
Location: 60295 - 61581 (+)
Gene ID: HRGMv2_2445_12_52
Type: pfam
Location: 61647 - 62387 (+)
Gene ID: HRGMv2_2445_12_53
Type: CAZyme
Location: 63397 - 64164 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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