Cluster: HRGMv2_2445_CGC12
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2445
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2445_10 | HRGMv2_2445_10_68 | 73458 | 76331 | + | CBM54 |
| TC | HRGMv2_2445_10 | HRGMv2_2445_10_69 | 76546 | 77352 | - | 3.A.1.17.1 |
| TC | HRGMv2_2445_10 | HRGMv2_2445_10_70 | 77345 | 78094 | - | 3.A.1.17.13 |
| pfam | HRGMv2_2445_10 | HRGMv2_2445_10_71 | 78279 | 79079 | + | adh_short | KR | adh_short_C2 |
| TC | HRGMv2_2445_10 | HRGMv2_2445_10_72 | 79392 | 80216 | + | 3.A.1.132.3 |
Gene ID: HRGMv2_2445_10_68
Type: CAZyme
Location: 73458 - 76331 (+)
Type: CAZyme
Location: 73458 - 76331 (+)
Gene ID: HRGMv2_2445_10_69
Type: TC
Location: 76546 - 77352 (-)
Type: TC
Location: 76546 - 77352 (-)
Gene ID: HRGMv2_2445_10_70
Type: TC
Location: 77345 - 78094 (-)
Type: TC
Location: 77345 - 78094 (-)
Gene ID: HRGMv2_2445_10_71
Type: pfam
Location: 78279 - 79079 (+)
Type: pfam
Location: 78279 - 79079 (+)
Gene ID: HRGMv2_2445_10_72
Type: TC
Location: 79392 - 80216 (+)
Type: TC
Location: 79392 - 80216 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Anaerotignaceae
Genus
JANFXS01
Species
JANFXS01 sp024460105
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.