Cluster: HRGMv2_2444_CGC5
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2444
- CGC Family ID: CGCFAM_06124
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2444_30 | HRGMv2_2444_30_5 | 5389 | 6813 | - | AA4 |
| TF | HRGMv2_2444_30 | HRGMv2_2444_30_6 | 6986 | 7681 | - | GntR |
| pfam | HRGMv2_2444_30 | HRGMv2_2444_30_7 | 8115 | 9080 | - | 2-Hacid_dh | 2-Hacid_dh_C | NAD_binding_2 |
| TC | HRGMv2_2444_30 | HRGMv2_2444_30_8 | 9368 | 10747 | + | 2.A.66.1.32 |
| TC | HRGMv2_2444_30 | HRGMv2_2444_30_9 | 10748 | 11353 | + | 2.A.115.2.14 |
Gene ID: HRGMv2_2444_30_5
Type: CAZyme
Location: 5389 - 6813 (-)
Type: CAZyme
Location: 5389 - 6813 (-)
Gene ID: HRGMv2_2444_30_6
Type: TF
Location: 6986 - 7681 (-)
Type: TF
Location: 6986 - 7681 (-)
Gene ID: HRGMv2_2444_30_7
Type: pfam
Location: 8115 - 9080 (-)
Type: pfam
Location: 8115 - 9080 (-)
Gene ID: HRGMv2_2444_30_8
Type: TC
Location: 9368 - 10747 (+)
Type: TC
Location: 9368 - 10747 (+)
Gene ID: HRGMv2_2444_30_9
Type: TC
Location: 10748 - 11353 (+)
Type: TC
Location: 10748 - 11353 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Anaerotignaceae
Genus
Metalachnospira
Species
Metalachnospira sp019423725
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.