Cluster: HRGMv2_2444_CGC3
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 3
- Substrate:
- Genome ID: HRGMv2_2444
- CGC Family ID: CGCFAM_00085
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2444_20 | HRGMv2_2444_20_2 | 1162 | 2580 | + | 9.B.67.1.1 |
| CAZyme | HRGMv2_2444_20 | HRGMv2_2444_20_3 | 2585 | 3697 | + | GT4 |
| pfam | HRGMv2_2444_20 | HRGMv2_2444_20_4 | 3708 | 4178 | + | DUF4330 |
| pfam | HRGMv2_2444_20 | HRGMv2_2444_20_5 | 4192 | 4668 | + | DUF4330 |
| CAZyme | HRGMv2_2444_20 | HRGMv2_2444_20_6 | 4695 | 6914 | + | GT4 |
| CAZyme | HRGMv2_2444_20 | HRGMv2_2444_20_7 | 6934 | 7656 | + | GT26 |
Gene ID: HRGMv2_2444_20_2
Type: TC
Location: 1162 - 2580 (+)
Type: TC
Location: 1162 - 2580 (+)
Gene ID: HRGMv2_2444_20_3
Type: CAZyme
Location: 2585 - 3697 (+)
Type: CAZyme
Location: 2585 - 3697 (+)
Gene ID: HRGMv2_2444_20_4
Type: pfam
Location: 3708 - 4178 (+)
Type: pfam
Location: 3708 - 4178 (+)
Gene ID: HRGMv2_2444_20_5
Type: pfam
Location: 4192 - 4668 (+)
Type: pfam
Location: 4192 - 4668 (+)
Gene ID: HRGMv2_2444_20_6
Type: CAZyme
Location: 4695 - 6914 (+)
Type: CAZyme
Location: 4695 - 6914 (+)
Gene ID: HRGMv2_2444_20_7
Type: CAZyme
Location: 6934 - 7656 (+)
Type: CAZyme
Location: 6934 - 7656 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Anaerotignaceae
Genus
Metalachnospira
Species
Metalachnospira sp019423725
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.