Cluster: HRGMv2_2443_CGC8
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2443
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2443_18 | HRGMv2_2443_18_25 | 24301 | 25401 | + | CE9 |
| TF | HRGMv2_2443_18 | HRGMv2_2443_18_26 | 25641 | 25943 | + | Trp_repressor |
| TC | HRGMv2_2443_18 | HRGMv2_2443_18_27 | 26440 | 27204 | + | 1.A.16.3.3 |
| TC | HRGMv2_2443_18 | HRGMv2_2443_18_28 | 27463 | 28506 | + | 3.A.1.17.3 |
Gene ID: HRGMv2_2443_18_25
Type: CAZyme
Location: 24301 - 25401 (+)
Type: CAZyme
Location: 24301 - 25401 (+)
Gene ID: HRGMv2_2443_18_26
Type: TF
Location: 25641 - 25943 (+)
Type: TF
Location: 25641 - 25943 (+)
Gene ID: HRGMv2_2443_18_27
Type: TC
Location: 26440 - 27204 (+)
Type: TC
Location: 26440 - 27204 (+)
Gene ID: HRGMv2_2443_18_28
Type: TC
Location: 27463 - 28506 (+)
Type: TC
Location: 27463 - 28506 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Pseudolachnospira
Species
Pseudolachnospira sp022867805
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.