Cluster: HRGMv2_2443_CGC4
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2443
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2443_11 | HRGMv2_2443_11_32 | 30171 | 31229 | - | 2.A.56.1.9 |
| NULL(UNKNOWN) | HRGMv2_2443_11 | HRGMv2_2443_11_33 | 31470 | 33368 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | HRGMv2_2443_11 | HRGMv2_2443_11_34 | 33517 | 33918 | + | PrcB_C |
| CAZyme | HRGMv2_2443_11 | HRGMv2_2443_11_35 | 33928 | 35490 | + | CBM50 |
Gene ID: HRGMv2_2443_11_32
Type: TC
Location: 30171 - 31229 (-)
Type: TC
Location: 30171 - 31229 (-)
Gene ID: HRGMv2_2443_11_33
Type:
Location: 31470 - 33368 (+)
Type:
Location: 31470 - 33368 (+)
Gene ID: HRGMv2_2443_11_34
Type: pfam
Location: 33517 - 33918 (+)
Type: pfam
Location: 33517 - 33918 (+)
Gene ID: HRGMv2_2443_11_35
Type: CAZyme
Location: 33928 - 35490 (+)
Type: CAZyme
Location: 33928 - 35490 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Pseudolachnospira
Species
Pseudolachnospira sp022867805
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.