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Cluster: HRGMv2_2443_CGC3

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2443_7 HRGMv2_2443_7_22 19432 21243 + 3.A.16.1.1
CAZyme HRGMv2_2443_7 HRGMv2_2443_7_23 21246 23267 + GH13_39
TC HRGMv2_2443_7 HRGMv2_2443_7_24 23602 24588 + 3.A.1.5.2
TC HRGMv2_2443_7 HRGMv2_2443_7_25 24581 25570 + 3.A.1.5.37
TC HRGMv2_2443_7 HRGMv2_2443_7_26 25567 26502 + 3.A.1.5.39
TC HRGMv2_2443_7 HRGMv2_2443_7_27 26536 27381 + 3.A.1.5.39
peptidase HRGMv2_2443_7 HRGMv2_2443_7_28 27406 29025 + M38.UNW
TC HRGMv2_2443_7 HRGMv2_2443_7_29 29088 30776 + 3.A.1.5.12
Gene ID: HRGMv2_2443_7_22
Type: TC
Location: 19432 - 21243 (+)
Gene ID: HRGMv2_2443_7_23
Type: CAZyme
Location: 21246 - 23267 (+)
Gene ID: HRGMv2_2443_7_24
Type: TC
Location: 23602 - 24588 (+)
Gene ID: HRGMv2_2443_7_25
Type: TC
Location: 24581 - 25570 (+)
Gene ID: HRGMv2_2443_7_26
Type: TC
Location: 25567 - 26502 (+)
Gene ID: HRGMv2_2443_7_27
Type: TC
Location: 26536 - 27381 (+)
Gene ID: HRGMv2_2443_7_28
Type: peptidase
Location: 27406 - 29025 (+)
Gene ID: HRGMv2_2443_7_29
Type: TC
Location: 29088 - 30776 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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