Cluster: HRGMv2_2443_CGC14
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2443
- CGC Family ID: CGCFAM_00075
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2443_62 | HRGMv2_2443_62_14 | 11895 | 13151 | - | GT2 |
| NULL(UNKNOWN) | HRGMv2_2443_62 | HRGMv2_2443_62_15 | 13299 | 14813 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | HRGMv2_2443_62 | HRGMv2_2443_62_16 | 15155 | 15814 | + | RHH_1 |
| TC | HRGMv2_2443_62 | HRGMv2_2443_62_17 | 15827 | 18418 | + | 3.A.9.1.2 |
Gene ID: HRGMv2_2443_62_14
Type: CAZyme
Location: 11895 - 13151 (-)
Type: CAZyme
Location: 11895 - 13151 (-)
Gene ID: HRGMv2_2443_62_15
Type:
Location: 13299 - 14813 (-)
Type:
Location: 13299 - 14813 (-)
Gene ID: HRGMv2_2443_62_16
Type: pfam
Location: 15155 - 15814 (+)
Type: pfam
Location: 15155 - 15814 (+)
Gene ID: HRGMv2_2443_62_17
Type: TC
Location: 15827 - 18418 (+)
Type: TC
Location: 15827 - 18418 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Pseudolachnospira
Species
Pseudolachnospira sp022867805
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.