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Cluster: HRGMv2_2443_CGC13

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2443_59 HRGMv2_2443_59_5 5216 5647 + 9.B.18.1.3
pfam HRGMv2_2443_59 HRGMv2_2443_59_6 5631 6737 + Amino_oxidase | GLF | NAD_binding_8
CAZyme HRGMv2_2443_59 HRGMv2_2443_59_7 6734 7795 + GT2
CAZyme HRGMv2_2443_59 HRGMv2_2443_59_8 7813 8877 + GT2
CAZyme HRGMv2_2443_59 HRGMv2_2443_59_9 8930 10108 + GT4
CAZyme HRGMv2_2443_59 HRGMv2_2443_59_10 10105 11112 + GT2
NULL(UNKNOWN) HRGMv2_2443_59 HRGMv2_2443_59_11 11250 12752 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_2443_59 HRGMv2_2443_59_12 12824 13798 + GT2
pfam HRGMv2_2443_59 HRGMv2_2443_59_13 13851 15155 + UDPG_MGDP_dh | UDPG_MGDP_dh_C | UDPG_MGDP_dh_N
CAZyme HRGMv2_2443_59 HRGMv2_2443_59_14 15164 16294 + GT4
CAZyme HRGMv2_2443_59 HRGMv2_2443_59_15 16284 17297 + GT2
pfam HRGMv2_2443_59 HRGMv2_2443_59_16 17317 18324 + Stealth_CR2 | Stealth_CR1 | Stealth_CR3 | Stealth_CR4
CAZyme HRGMv2_2443_59 HRGMv2_2443_59_17 18321 19421 + GT4
CAZyme HRGMv2_2443_59 HRGMv2_2443_59_18 19418 20539 + GT2
TC HRGMv2_2443_59 HRGMv2_2443_59_19 20481 21764 + 2.A.66.2.9
Gene ID: HRGMv2_2443_59_5
Type: TC
Location: 5216 - 5647 (+)
Gene ID: HRGMv2_2443_59_6
Type: pfam
Location: 5631 - 6737 (+)
Gene ID: HRGMv2_2443_59_7
Type: CAZyme
Location: 6734 - 7795 (+)
Gene ID: HRGMv2_2443_59_8
Type: CAZyme
Location: 7813 - 8877 (+)
Gene ID: HRGMv2_2443_59_9
Type: CAZyme
Location: 8930 - 10108 (+)
Gene ID: HRGMv2_2443_59_10
Type: CAZyme
Location: 10105 - 11112 (+)
Gene ID: HRGMv2_2443_59_11
Type:
Location: 11250 - 12752 (+)
Gene ID: HRGMv2_2443_59_12
Type: CAZyme
Location: 12824 - 13798 (+)
Gene ID: HRGMv2_2443_59_13
Type: pfam
Location: 13851 - 15155 (+)
Gene ID: HRGMv2_2443_59_14
Type: CAZyme
Location: 15164 - 16294 (+)
Gene ID: HRGMv2_2443_59_15
Type: CAZyme
Location: 16284 - 17297 (+)
Gene ID: HRGMv2_2443_59_16
Type: pfam
Location: 17317 - 18324 (+)
Gene ID: HRGMv2_2443_59_17
Type: CAZyme
Location: 18321 - 19421 (+)
Gene ID: HRGMv2_2443_59_18
Type: CAZyme
Location: 19418 - 20539 (+)
Gene ID: HRGMv2_2443_59_19
Type: TC
Location: 20481 - 21764 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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