Cluster: HRGMv2_2443_CGC11
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2443
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2443_33 | HRGMv2_2443_33_24 | 22452 | 24662 | + | 3.A.11.1.1 |
| pfam | HRGMv2_2443_33 | HRGMv2_2443_33_25 | 24683 | 25408 | - | GDPD |
| CAZyme | HRGMv2_2443_33 | HRGMv2_2443_33_26 | 25547 | 26206 | + | CE4 |
Gene ID: HRGMv2_2443_33_24
Type: TC
Location: 22452 - 24662 (+)
Type: TC
Location: 22452 - 24662 (+)
Gene ID: HRGMv2_2443_33_25
Type: pfam
Location: 24683 - 25408 (-)
Type: pfam
Location: 24683 - 25408 (-)
Gene ID: HRGMv2_2443_33_26
Type: CAZyme
Location: 25547 - 26206 (+)
Type: CAZyme
Location: 25547 - 26206 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Pseudolachnospira
Species
Pseudolachnospira sp022867805
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.