Cluster: HRGMv2_2443_CGC10
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2443
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2443_31 | HRGMv2_2443_31_1 | 2 | 409 | + | 2.A.56.1.6 |
| TC | HRGMv2_2443_31 | HRGMv2_2443_31_2 | 415 | 840 | + | 2.A.56.1.5 |
| STP | HRGMv2_2443_31 | HRGMv2_2443_31_3 | 916 | 2046 | + | DctP |
| CAZyme | HRGMv2_2443_31 | HRGMv2_2443_31_4 | 2257 | 4758 | + | GH51_2 |
Gene ID: HRGMv2_2443_31_1
Type: TC
Location: 2 - 409 (+)
Type: TC
Location: 2 - 409 (+)
Gene ID: HRGMv2_2443_31_2
Type: TC
Location: 415 - 840 (+)
Type: TC
Location: 415 - 840 (+)
Gene ID: HRGMv2_2443_31_3
Type: STP
Location: 916 - 2046 (+)
Type: STP
Location: 916 - 2046 (+)
Gene ID: HRGMv2_2443_31_4
Type: CAZyme
Location: 2257 - 4758 (+)
Type: CAZyme
Location: 2257 - 4758 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Pseudolachnospira
Species
Pseudolachnospira sp022867805
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.