Cluster: HRGMv2_2442_CGC6
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2442
- CGC Family ID: CGCFAM_00593
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2442_2 | HRGMv2_2442_2_54 | 57110 | 58600 | - | 1.B.52.2.1 |
| TF | HRGMv2_2442_2 | HRGMv2_2442_2_55 | 58782 | 59159 | + | Fe_dep_repress |
| TF | HRGMv2_2442_2 | HRGMv2_2442_2_56 | 59172 | 60020 | - | HTH_AraC | HTH_AraC |
| CAZyme | HRGMv2_2442_2 | HRGMv2_2442_2_57 | 60040 | 61086 | - | GT2 |
Gene ID: HRGMv2_2442_2_54
Type: TC
Location: 57110 - 58600 (-)
Type: TC
Location: 57110 - 58600 (-)
Gene ID: HRGMv2_2442_2_55
Type: TF
Location: 58782 - 59159 (+)
Type: TF
Location: 58782 - 59159 (+)
Gene ID: HRGMv2_2442_2_56
Type: TF
Location: 59172 - 60020 (-)
Type: TF
Location: 59172 - 60020 (-)
Gene ID: HRGMv2_2442_2_57
Type: CAZyme
Location: 60040 - 61086 (-)
Type: CAZyme
Location: 60040 - 61086 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
CAJJNI01
Species
CAJJNI01 sp905193085
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.