Cluster: HRGMv2_2442_CGC5
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2442
- CGC Family ID: CGCFAM_04240
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2442_1 | HRGMv2_2442_1_505 | 570703 | 572733 | + | GT2 |
| pfam | HRGMv2_2442_1 | HRGMv2_2442_1_506 | 572925 | 578900 | - | Dockerin_1 | FMN_bind |
| pfam | HRGMv2_2442_1 | HRGMv2_2442_1_507 | 579321 | 581573 | - | FtsX | FtsX |
| TC | HRGMv2_2442_1 | HRGMv2_2442_1_508 | 581613 | 582317 | - | 3.A.1.122.7 |
Gene ID: HRGMv2_2442_1_505
Type: CAZyme
Location: 570703 - 572733 (+)
Type: CAZyme
Location: 570703 - 572733 (+)
Gene ID: HRGMv2_2442_1_506
Type: pfam
Location: 572925 - 578900 (-)
Type: pfam
Location: 572925 - 578900 (-)
Gene ID: HRGMv2_2442_1_507
Type: pfam
Location: 579321 - 581573 (-)
Type: pfam
Location: 579321 - 581573 (-)
Gene ID: HRGMv2_2442_1_508
Type: TC
Location: 581613 - 582317 (-)
Type: TC
Location: 581613 - 582317 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
CAJJNI01
Species
CAJJNI01 sp905193085
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.