Cluster: HRGMv2_2442_CGC29
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_2442
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2442_27 | HRGMv2_2442_27_162 | 210813 | 211700 | + | 3.A.1.1.11 |
| TC | HRGMv2_2442_27 | HRGMv2_2442_27_163 | 211707 | 212723 | + | 3.A.1.1.34 |
| NULL(UNKNOWN) | HRGMv2_2442_27 | HRGMv2_2442_27_164 | 212893 | 214554 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| peptidase | HRGMv2_2442_27 | HRGMv2_2442_27_165 | 214665 | 215696 | + | S09.UPW |
| CAZyme | HRGMv2_2442_27 | HRGMv2_2442_27_166 | 215853 | 218984 | + | GH106 |
| CAZyme | HRGMv2_2442_27 | HRGMv2_2442_27_167 | 219007 | 221142 | + | GH142 |
Gene ID: HRGMv2_2442_27_162
Type: TC
Location: 210813 - 211700 (+)
Type: TC
Location: 210813 - 211700 (+)
Gene ID: HRGMv2_2442_27_163
Type: TC
Location: 211707 - 212723 (+)
Type: TC
Location: 211707 - 212723 (+)
Gene ID: HRGMv2_2442_27_164
Type:
Location: 212893 - 214554 (+)
Type:
Location: 212893 - 214554 (+)
Gene ID: HRGMv2_2442_27_165
Type: peptidase
Location: 214665 - 215696 (+)
Type: peptidase
Location: 214665 - 215696 (+)
Gene ID: HRGMv2_2442_27_166
Type: CAZyme
Location: 215853 - 218984 (+)
Type: CAZyme
Location: 215853 - 218984 (+)
Gene ID: HRGMv2_2442_27_167
Type: CAZyme
Location: 219007 - 221142 (+)
Type: CAZyme
Location: 219007 - 221142 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
CAJJNI01
Species
CAJJNI01 sp905193085
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.