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Cluster: HRGMv2_2442_CGC28

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2442_27 HRGMv2_2442_27_146 184738 186078 + 2.A.66.1.33
NULL(UNKNOWN) HRGMv2_2442_27 HRGMv2_2442_27_147 186222 186608 + NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_2442_27 HRGMv2_2442_27_148 186709 189048 + 9.A.8.1.6
pfam HRGMv2_2442_27 HRGMv2_2442_27_149 189315 189623 - Phage_integrase
TC HRGMv2_2442_27 HRGMv2_2442_27_150 190451 192640 - 3.A.1.135.5
pfam HRGMv2_2442_27 HRGMv2_2442_27_151 192657 193346 - DUF1854
TC HRGMv2_2442_27 HRGMv2_2442_27_152 193358 195136 - 3.A.1.106.3
CAZyme HRGMv2_2442_27 HRGMv2_2442_27_153 195138 197024 - GH143
CAZyme HRGMv2_2442_27 HRGMv2_2442_27_154 197008 199371 - GH33
pfam HRGMv2_2442_27 HRGMv2_2442_27_155 200008 200889 + DHDPS
STP HRGMv2_2442_27 HRGMv2_2442_27_156 201215 204484 + SBP_bac_1
TC HRGMv2_2442_27 HRGMv2_2442_27_157 204494 205432 + 3.A.1.1.34
TC HRGMv2_2442_27 HRGMv2_2442_27_158 205447 206388 + 3.A.1.1.39
Gene ID: HRGMv2_2442_27_146
Type: TC
Location: 184738 - 186078 (+)
Gene ID: HRGMv2_2442_27_147
Type:
Location: 186222 - 186608 (+)
Gene ID: HRGMv2_2442_27_148
Type: TC
Location: 186709 - 189048 (+)
Gene ID: HRGMv2_2442_27_149
Type: pfam
Location: 189315 - 189623 (-)
Gene ID: HRGMv2_2442_27_150
Type: TC
Location: 190451 - 192640 (-)
Gene ID: HRGMv2_2442_27_151
Type: pfam
Location: 192657 - 193346 (-)
Gene ID: HRGMv2_2442_27_152
Type: TC
Location: 193358 - 195136 (-)
Gene ID: HRGMv2_2442_27_153
Type: CAZyme
Location: 195138 - 197024 (-)
Gene ID: HRGMv2_2442_27_154
Type: CAZyme
Location: 197008 - 199371 (-)
Gene ID: HRGMv2_2442_27_155
Type: pfam
Location: 200008 - 200889 (+)
Gene ID: HRGMv2_2442_27_156
Type: STP
Location: 201215 - 204484 (+)
Gene ID: HRGMv2_2442_27_157
Type: TC
Location: 204494 - 205432 (+)
Gene ID: HRGMv2_2442_27_158
Type: TC
Location: 205447 - 206388 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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