Cluster: HRGMv2_2442_CGC27
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2442
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2442_24 | HRGMv2_2442_24_278 | 329644 | 331821 | + | 2.A.6.4.2 |
| CAZyme | HRGMv2_2442_24 | HRGMv2_2442_24_279 | 331929 | 333203 | + | GH28 |
| pfam | HRGMv2_2442_24 | HRGMv2_2442_24_280 | 333547 | 334557 | - | GGGtGRT |
| pfam | HRGMv2_2442_24 | HRGMv2_2442_24_281 | 334576 | 335268 | - | NifU_N |
| TC | HRGMv2_2442_24 | HRGMv2_2442_24_282 | 335479 | 336831 | - | 2.A.66.1.33 |
Gene ID: HRGMv2_2442_24_278
Type: TC
Location: 329644 - 331821 (+)
Type: TC
Location: 329644 - 331821 (+)
Gene ID: HRGMv2_2442_24_279
Type: CAZyme
Location: 331929 - 333203 (+)
Type: CAZyme
Location: 331929 - 333203 (+)
Gene ID: HRGMv2_2442_24_280
Type: pfam
Location: 333547 - 334557 (-)
Type: pfam
Location: 333547 - 334557 (-)
Gene ID: HRGMv2_2442_24_281
Type: pfam
Location: 334576 - 335268 (-)
Type: pfam
Location: 334576 - 335268 (-)
Gene ID: HRGMv2_2442_24_282
Type: TC
Location: 335479 - 336831 (-)
Type: TC
Location: 335479 - 336831 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
CAJJNI01
Species
CAJJNI01 sp905193085
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.