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Cluster: HRGMv2_2442_CGC2

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_2442_1 HRGMv2_2442_1_85 98276 99133 - GT32
CAZyme HRGMv2_2442_1 HRGMv2_2442_1_86 99146 100087 - GT32
CAZyme HRGMv2_2442_1 HRGMv2_2442_1_87 100121 101119 - GT2
pfam HRGMv2_2442_1 HRGMv2_2442_1_88 101121 102509 - Wzy_C
CAZyme HRGMv2_2442_1 HRGMv2_2442_1_89 102514 103455 - GT2
CAZyme HRGMv2_2442_1 HRGMv2_2442_1_90 103459 104436 - GT2
pfam HRGMv2_2442_1 HRGMv2_2442_1_91 104448 105110 - CpsB_CapC
TC HRGMv2_2442_1 HRGMv2_2442_1_92 105100 106485 - 8.A.3.1.2
Gene ID: HRGMv2_2442_1_85
Type: CAZyme
Location: 98276 - 99133 (-)
Gene ID: HRGMv2_2442_1_86
Type: CAZyme
Location: 99146 - 100087 (-)
Gene ID: HRGMv2_2442_1_87
Type: CAZyme
Location: 100121 - 101119 (-)
Gene ID: HRGMv2_2442_1_88
Type: pfam
Location: 101121 - 102509 (-)
Gene ID: HRGMv2_2442_1_89
Type: CAZyme
Location: 102514 - 103455 (-)
Gene ID: HRGMv2_2442_1_90
Type: CAZyme
Location: 103459 - 104436 (-)
Gene ID: HRGMv2_2442_1_91
Type: pfam
Location: 104448 - 105110 (-)
Gene ID: HRGMv2_2442_1_92
Type: TC
Location: 105100 - 106485 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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