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Cluster: HRGMv2_2442_CGC12

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2442_9 HRGMv2_2442_9_44 48862 49269 - 3.A.2.1.5
TC HRGMv2_2442_9 HRGMv2_2442_9_45 49283 50674 - 3.A.2.1.5
TC HRGMv2_2442_9 HRGMv2_2442_9_46 50713 51573 - 3.A.2.1.5
TC HRGMv2_2442_9 HRGMv2_2442_9_47 51588 53096 - 3.A.2.1.5
TC HRGMv2_2442_9 HRGMv2_2442_9_48 53162 53713 - 3.A.2.1.2
pfam HRGMv2_2442_9 HRGMv2_2442_9_49 53701 54270 - ATP-synt_B
TC HRGMv2_2442_9 HRGMv2_2442_9_50 54354 54605 - 3.A.2.1.5
TC HRGMv2_2442_9 HRGMv2_2442_9_51 54640 55404 - 3.A.2.1.5
NULL(UNKNOWN) HRGMv2_2442_9 HRGMv2_2442_9_52 55466 55858 - NULL(UNKNOWN)
[View Structural Homologs]
pfam HRGMv2_2442_9 HRGMv2_2442_9_53 55845 56087 - ATPase_gene1
CAZyme HRGMv2_2442_9 HRGMv2_2442_9_54 56347 58704 - GT51
Gene ID: HRGMv2_2442_9_44
Type: TC
Location: 48862 - 49269 (-)
Gene ID: HRGMv2_2442_9_45
Type: TC
Location: 49283 - 50674 (-)
Gene ID: HRGMv2_2442_9_46
Type: TC
Location: 50713 - 51573 (-)
Gene ID: HRGMv2_2442_9_47
Type: TC
Location: 51588 - 53096 (-)
Gene ID: HRGMv2_2442_9_48
Type: TC
Location: 53162 - 53713 (-)
Gene ID: HRGMv2_2442_9_49
Type: pfam
Location: 53701 - 54270 (-)
Gene ID: HRGMv2_2442_9_50
Type: TC
Location: 54354 - 54605 (-)
Gene ID: HRGMv2_2442_9_51
Type: TC
Location: 54640 - 55404 (-)
Gene ID: HRGMv2_2442_9_52
Type:
Location: 55466 - 55858 (-)
Gene ID: HRGMv2_2442_9_53
Type: pfam
Location: 55845 - 56087 (-)
Gene ID: HRGMv2_2442_9_54
Type: CAZyme
Location: 56347 - 58704 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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