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Cluster: HRGMv2_2437_CGC9

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2437_4 HRGMv2_2437_4_64 60615 61967 + 2.A.45.2.2
pfam HRGMv2_2437_4 HRGMv2_2437_4_65 62208 62615 - PNPOx_N | Pyrid_ox_like
TC HRGMv2_2437_4 HRGMv2_2437_4_66 62698 64065 + 2.A.66.1.32
TF HRGMv2_2437_4 HRGMv2_2437_4_67 64013 64813 - HTH_AraC | HTH_AraC
CAZyme HRGMv2_2437_4 HRGMv2_2437_4_68 64941 66263 + GH4
pfam HRGMv2_2437_4 HRGMv2_2437_4_69 66383 68794 + tRNA-synt_1 | tRNA-synt_1 | Anticodon_1 | tRNA-synt_1g | tRNA-synt_1g | tRNA-synt_1_2
TC HRGMv2_2437_4 HRGMv2_2437_4_70 68815 69813 + 8.A.5.1.3
TC HRGMv2_2437_4 HRGMv2_2437_4_71 69944 70927 + 3.A.1.5.20
TC HRGMv2_2437_4 HRGMv2_2437_4_72 70930 71820 + 3.A.1.5.2
TC HRGMv2_2437_4 HRGMv2_2437_4_73 71820 73418 + 3.A.1.5.28
TC HRGMv2_2437_4 HRGMv2_2437_4_74 73411 74421 + 3.A.1.5.19
TC HRGMv2_2437_4 HRGMv2_2437_4_75 74423 75256 + 3.A.1.5.19
Gene ID: HRGMv2_2437_4_64
Type: TC
Location: 60615 - 61967 (+)
Gene ID: HRGMv2_2437_4_65
Type: pfam
Location: 62208 - 62615 (-)
Gene ID: HRGMv2_2437_4_66
Type: TC
Location: 62698 - 64065 (+)
Gene ID: HRGMv2_2437_4_67
Type: TF
Location: 64013 - 64813 (-)
Gene ID: HRGMv2_2437_4_68
Type: CAZyme
Location: 64941 - 66263 (+)
Gene ID: HRGMv2_2437_4_69
Type: pfam
Location: 66383 - 68794 (+)
Gene ID: HRGMv2_2437_4_70
Type: TC
Location: 68815 - 69813 (+)
Gene ID: HRGMv2_2437_4_71
Type: TC
Location: 69944 - 70927 (+)
Gene ID: HRGMv2_2437_4_72
Type: TC
Location: 70930 - 71820 (+)
Gene ID: HRGMv2_2437_4_73
Type: TC
Location: 71820 - 73418 (+)
Gene ID: HRGMv2_2437_4_74
Type: TC
Location: 73411 - 74421 (+)
Gene ID: HRGMv2_2437_4_75
Type: TC
Location: 74423 - 75256 (+)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacillota_A
→
Class
Clostridia
→
Order
Lachnospirales
→
Family
Lachnospiraceae
→
Genus
TWA4
→
Species
TWA4 sp902496125

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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