Cluster: HRGMv2_2437_CGC7
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2437
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2437_2 | HRGMv2_2437_2_196 | 225131 | 226399 | - | 9.A.40.2.1 |
| pfam | HRGMv2_2437_2 | HRGMv2_2437_2_197 | 226718 | 228442 | - | fn3 | VanW |
| CAZyme | HRGMv2_2437_2 | HRGMv2_2437_2_198 | 228472 | 229242 | - | GT111 |
| NULL(UNKNOWN) | HRGMv2_2437_2 | HRGMv2_2437_2_199 | 229248 | 229505 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | HRGMv2_2437_2 | HRGMv2_2437_2_200 | 229459 | 231459 | - | 3.A.16.1.1 |
Gene ID: HRGMv2_2437_2_196
Type: TC
Location: 225131 - 226399 (-)
Type: TC
Location: 225131 - 226399 (-)
Gene ID: HRGMv2_2437_2_197
Type: pfam
Location: 226718 - 228442 (-)
Type: pfam
Location: 226718 - 228442 (-)
Gene ID: HRGMv2_2437_2_198
Type: CAZyme
Location: 228472 - 229242 (-)
Type: CAZyme
Location: 228472 - 229242 (-)
Gene ID: HRGMv2_2437_2_199
Type:
Location: 229248 - 229505 (-)
Type:
Location: 229248 - 229505 (-)
Gene ID: HRGMv2_2437_2_200
Type: TC
Location: 229459 - 231459 (-)
Type: TC
Location: 229459 - 231459 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
TWA4
Species
TWA4 sp902496125
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.