Cluster: HRGMv2_2437_CGC3
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2437
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2437_1 | HRGMv2_2437_1_248 | 262833 | 264713 | - | GH13_9 |
| pfam | HRGMv2_2437_1 | HRGMv2_2437_1_249 | 264900 | 265649 | + | RelA_SpoT |
| TC | HRGMv2_2437_1 | HRGMv2_2437_1_250 | 265708 | 267120 | - | 3.B.1.1.6 |
| TC | HRGMv2_2437_1 | HRGMv2_2437_1_251 | 267143 | 268267 | - | 3.B.1.1.2 |
| pfam | HRGMv2_2437_1 | HRGMv2_2437_1_252 | 268286 | 268657 | - | Biotin_lipoyl |
| pfam | HRGMv2_2437_1 | HRGMv2_2437_1_253 | 268671 | 269009 | - | OAD_gamma |
| TC | HRGMv2_2437_1 | HRGMv2_2437_1_254 | 269031 | 270425 | - | 3.B.1.1.5 |
Gene ID: HRGMv2_2437_1_248
Type: CAZyme
Location: 262833 - 264713 (-)
Type: CAZyme
Location: 262833 - 264713 (-)
Gene ID: HRGMv2_2437_1_249
Type: pfam
Location: 264900 - 265649 (+)
Type: pfam
Location: 264900 - 265649 (+)
Gene ID: HRGMv2_2437_1_250
Type: TC
Location: 265708 - 267120 (-)
Type: TC
Location: 265708 - 267120 (-)
Gene ID: HRGMv2_2437_1_251
Type: TC
Location: 267143 - 268267 (-)
Type: TC
Location: 267143 - 268267 (-)
Gene ID: HRGMv2_2437_1_252
Type: pfam
Location: 268286 - 268657 (-)
Type: pfam
Location: 268286 - 268657 (-)
Gene ID: HRGMv2_2437_1_253
Type: pfam
Location: 268671 - 269009 (-)
Type: pfam
Location: 268671 - 269009 (-)
Gene ID: HRGMv2_2437_1_254
Type: TC
Location: 269031 - 270425 (-)
Type: TC
Location: 269031 - 270425 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
TWA4
Species
TWA4 sp902496125
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.