dbCAN Logo

Cluster: HRGMv2_2437_CGC25

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_2437_33 HRGMv2_2437_33_1 406 2493 + GH31_1
TC HRGMv2_2437_33 HRGMv2_2437_33_2 2529 3923 - 2.A.40.2.1
pfam HRGMv2_2437_33 HRGMv2_2437_33_3 3953 6598 - tRNA-synt_1 | Anticodon_1 | tRNA-synt_1g | tRNA-synt_1g | Val_tRNA-synt_C | tRNA-synt_1_2
pfam HRGMv2_2437_33 HRGMv2_2437_33_4 6901 7557 - PhoU | PhoU
TC HRGMv2_2437_33 HRGMv2_2437_33_5 7581 8339 - 3.A.1.7.5
TC HRGMv2_2437_33 HRGMv2_2437_33_6 8351 9262 - 3.A.1.7.5
TC HRGMv2_2437_33 HRGMv2_2437_33_7 9262 10182 - 3.A.1.7.5
pfam HRGMv2_2437_33 HRGMv2_2437_33_8 10196 11086 - PBP_like | PBP_like_2 | SBP_bac_11
pfam HRGMv2_2437_33 HRGMv2_2437_33_9 11225 11992 - Thymidylat_synt
TC HRGMv2_2437_33 HRGMv2_2437_33_10 12217 14580 - 9.A.8.1.6
Gene ID: HRGMv2_2437_33_1
Type: CAZyme
Location: 406 - 2493 (+)
Gene ID: HRGMv2_2437_33_2
Type: TC
Location: 2529 - 3923 (-)
Gene ID: HRGMv2_2437_33_3
Type: pfam
Location: 3953 - 6598 (-)
Gene ID: HRGMv2_2437_33_4
Type: pfam
Location: 6901 - 7557 (-)
Gene ID: HRGMv2_2437_33_5
Type: TC
Location: 7581 - 8339 (-)
Gene ID: HRGMv2_2437_33_6
Type: TC
Location: 8351 - 9262 (-)
Gene ID: HRGMv2_2437_33_7
Type: TC
Location: 9262 - 10182 (-)
Gene ID: HRGMv2_2437_33_8
Type: pfam
Location: 10196 - 11086 (-)
Gene ID: HRGMv2_2437_33_9
Type: pfam
Location: 11225 - 11992 (-)
Gene ID: HRGMv2_2437_33_10
Type: TC
Location: 12217 - 14580 (-)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacillota_A
→
Class
Clostridia
→
Order
Lachnospirales
→
Family
Lachnospiraceae
→
Genus
TWA4
→
Species
TWA4 sp902496125

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List