Cluster: HRGMv2_2437_CGC22
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2437
- CGC Family ID: CGCFAM_00642
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2437_24 | HRGMv2_2437_24_24 | 20556 | 20726 | - | 1.E.52.1.1 |
| NULL(UNKNOWN) | HRGMv2_2437_24 | HRGMv2_2437_24_25 | 20738 | 22147 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | HRGMv2_2437_24 | HRGMv2_2437_24_26 | 22149 | 22856 | - | T2SSF |
| TC | HRGMv2_2437_24 | HRGMv2_2437_24_27 | 22876 | 24057 | - | 3.A.7.15.1 |
| NULL(UNKNOWN) | HRGMv2_2437_24 | HRGMv2_2437_24_28 | 24048 | 24998 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_2437_24 | HRGMv2_2437_24_29 | 25110 | 27002 | - | CBM48 | GH13_9 |
Gene ID: HRGMv2_2437_24_24
Type: TC
Location: 20556 - 20726 (-)
Type: TC
Location: 20556 - 20726 (-)
Gene ID: HRGMv2_2437_24_25
Type:
Location: 20738 - 22147 (-)
Type:
Location: 20738 - 22147 (-)
Gene ID: HRGMv2_2437_24_26
Type: pfam
Location: 22149 - 22856 (-)
Type: pfam
Location: 22149 - 22856 (-)
Gene ID: HRGMv2_2437_24_27
Type: TC
Location: 22876 - 24057 (-)
Type: TC
Location: 22876 - 24057 (-)
Gene ID: HRGMv2_2437_24_28
Type:
Location: 24048 - 24998 (-)
Type:
Location: 24048 - 24998 (-)
Gene ID: HRGMv2_2437_24_29
Type: CAZyme
Location: 25110 - 27002 (-)
Type: CAZyme
Location: 25110 - 27002 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
TWA4
Species
TWA4 sp902496125
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.