Cluster: HRGMv2_2437_CGC2
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 3
- Substrate:
- Genome ID: HRGMv2_2437
- CGC Family ID: CGCFAM_00006
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2437_1 | HRGMv2_2437_1_204 | 205033 | 206088 | - | GT4 |
| CAZyme | HRGMv2_2437_1 | HRGMv2_2437_1_205 | 206085 | 207170 | - | GT4 |
| pfam | HRGMv2_2437_1 | HRGMv2_2437_1_206 | 207174 | 207725 | - | Hexapep | Hexapep_2 |
| CAZyme | HRGMv2_2437_1 | HRGMv2_2437_1_207 | 207694 | 210666 | - | GT4 |
| TC | HRGMv2_2437_1 | HRGMv2_2437_1_208 | 210690 | 212672 | - | 9.B.18.2.1 |
| pfam | HRGMv2_2437_1 | HRGMv2_2437_1_209 | 212871 | 213716 | - | Phage_integrase | Phage_int_SAM_1 |
| TC | HRGMv2_2437_1 | HRGMv2_2437_1_210 | 213774 | 215504 | - | 3.A.1.106.8 |
Gene ID: HRGMv2_2437_1_204
Type: CAZyme
Location: 205033 - 206088 (-)
Type: CAZyme
Location: 205033 - 206088 (-)
Gene ID: HRGMv2_2437_1_205
Type: CAZyme
Location: 206085 - 207170 (-)
Type: CAZyme
Location: 206085 - 207170 (-)
Gene ID: HRGMv2_2437_1_206
Type: pfam
Location: 207174 - 207725 (-)
Type: pfam
Location: 207174 - 207725 (-)
Gene ID: HRGMv2_2437_1_207
Type: CAZyme
Location: 207694 - 210666 (-)
Type: CAZyme
Location: 207694 - 210666 (-)
Gene ID: HRGMv2_2437_1_208
Type: TC
Location: 210690 - 212672 (-)
Type: TC
Location: 210690 - 212672 (-)
Gene ID: HRGMv2_2437_1_209
Type: pfam
Location: 212871 - 213716 (-)
Type: pfam
Location: 212871 - 213716 (-)
Gene ID: HRGMv2_2437_1_210
Type: TC
Location: 213774 - 215504 (-)
Type: TC
Location: 213774 - 215504 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
TWA4
Species
TWA4 sp902496125
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.