Cluster: HRGMv2_2437_CGC17
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2437
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2437_14 | HRGMv2_2437_14_47 | 46933 | 48138 | + | 3.D.10.1.4 |
| pfam | HRGMv2_2437_14 | HRGMv2_2437_14_48 | 48151 | 49002 | + | QRPTase_C | QRPTase_N |
| CAZyme | HRGMv2_2437_14 | HRGMv2_2437_14_49 | 49302 | 51281 | + | GH13_4 |
| TF | HRGMv2_2437_14 | HRGMv2_2437_14_50 | 51283 | 52272 | + | LacI |
| TC | HRGMv2_2437_14 | HRGMv2_2437_14_51 | 52573 | 54198 | + | 8.A.7.1.1 |
| pfam | HRGMv2_2437_14 | HRGMv2_2437_14_52 | 54319 | 55068 | + | PP2C_2 |
| TC | HRGMv2_2437_14 | HRGMv2_2437_14_53 | 55062 | 56726 | + | 1.E.43.3.3 |
Gene ID: HRGMv2_2437_14_47
Type: TC
Location: 46933 - 48138 (+)
Type: TC
Location: 46933 - 48138 (+)
Gene ID: HRGMv2_2437_14_48
Type: pfam
Location: 48151 - 49002 (+)
Type: pfam
Location: 48151 - 49002 (+)
Gene ID: HRGMv2_2437_14_49
Type: CAZyme
Location: 49302 - 51281 (+)
Type: CAZyme
Location: 49302 - 51281 (+)
Gene ID: HRGMv2_2437_14_50
Type: TF
Location: 51283 - 52272 (+)
Type: TF
Location: 51283 - 52272 (+)
Gene ID: HRGMv2_2437_14_51
Type: TC
Location: 52573 - 54198 (+)
Type: TC
Location: 52573 - 54198 (+)
Gene ID: HRGMv2_2437_14_52
Type: pfam
Location: 54319 - 55068 (+)
Type: pfam
Location: 54319 - 55068 (+)
Gene ID: HRGMv2_2437_14_53
Type: TC
Location: 55062 - 56726 (+)
Type: TC
Location: 55062 - 56726 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
TWA4
Species
TWA4 sp902496125
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.