Cluster: HRGMv2_2437_CGC14
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2437
- CGC Family ID: CGCFAM_00202
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2437_9 | HRGMv2_2437_9_89 | 85580 | 86482 | - | 3.A.1.132.6 |
| TF | HRGMv2_2437_9 | HRGMv2_2437_9_90 | 86475 | 86852 | - | GntR |
| CAZyme | HRGMv2_2437_9 | HRGMv2_2437_9_91 | 87384 | 88403 | - | GT2 |
| pfam | HRGMv2_2437_9 | HRGMv2_2437_9_92 | 88416 | 89345 | - | OMPdecase |
| NULL(UNKNOWN) | HRGMv2_2437_9 | HRGMv2_2437_9_93 | 89361 | 89573 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | HRGMv2_2437_9 | HRGMv2_2437_9_94 | 89688 | 93158 | - | 3.B.1.1.1 |
Gene ID: HRGMv2_2437_9_89
Type: TC
Location: 85580 - 86482 (-)
Type: TC
Location: 85580 - 86482 (-)
Gene ID: HRGMv2_2437_9_90
Type: TF
Location: 86475 - 86852 (-)
Type: TF
Location: 86475 - 86852 (-)
Gene ID: HRGMv2_2437_9_91
Type: CAZyme
Location: 87384 - 88403 (-)
Type: CAZyme
Location: 87384 - 88403 (-)
Gene ID: HRGMv2_2437_9_92
Type: pfam
Location: 88416 - 89345 (-)
Type: pfam
Location: 88416 - 89345 (-)
Gene ID: HRGMv2_2437_9_93
Type:
Location: 89361 - 89573 (-)
Type:
Location: 89361 - 89573 (-)
Gene ID: HRGMv2_2437_9_94
Type: TC
Location: 89688 - 93158 (-)
Type: TC
Location: 89688 - 93158 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
TWA4
Species
TWA4 sp902496125
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.