Cluster: HRGMv2_2437_CGC11
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2437
- CGC Family ID: CGCFAM_03079
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2437_5 | HRGMv2_2437_5_28 | 30846 | 31838 | - | GT2 |
| TC | HRGMv2_2437_5 | HRGMv2_2437_5_29 | 31891 | 33810 | - | 3.A.1.135.5 |
| TC | HRGMv2_2437_5 | HRGMv2_2437_5_30 | 33810 | 35561 | - | 3.A.1.135.5 |
| TF | HRGMv2_2437_5 | HRGMv2_2437_5_31 | 35728 | 36177 | + | MarR |
| STP | HRGMv2_2437_5 | HRGMv2_2437_5_32 | 36203 | 36832 | - | Pribosyltran |
| TC | HRGMv2_2437_5 | HRGMv2_2437_5_33 | 36846 | 38171 | - | 2.A.40.1.2 |
Gene ID: HRGMv2_2437_5_28
Type: CAZyme
Location: 30846 - 31838 (-)
Type: CAZyme
Location: 30846 - 31838 (-)
Gene ID: HRGMv2_2437_5_29
Type: TC
Location: 31891 - 33810 (-)
Type: TC
Location: 31891 - 33810 (-)
Gene ID: HRGMv2_2437_5_30
Type: TC
Location: 33810 - 35561 (-)
Type: TC
Location: 33810 - 35561 (-)
Gene ID: HRGMv2_2437_5_31
Type: TF
Location: 35728 - 36177 (+)
Type: TF
Location: 35728 - 36177 (+)
Gene ID: HRGMv2_2437_5_32
Type: STP
Location: 36203 - 36832 (-)
Type: STP
Location: 36203 - 36832 (-)
Gene ID: HRGMv2_2437_5_33
Type: TC
Location: 36846 - 38171 (-)
Type: TC
Location: 36846 - 38171 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
TWA4
Species
TWA4 sp902496125
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.