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Cluster: HRGMv2_2421_CGC9

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2421_29 HRGMv2_2421_29_8 5414 6772 + 2.A.66.1.10
pfam HRGMv2_2421_29 HRGMv2_2421_29_9 6968 7516 + Flavodoxin_2 | FMN_red
TC HRGMv2_2421_29 HRGMv2_2421_29_10 7944 8465 + 3.A.1.26.5
STP HRGMv2_2421_29 HRGMv2_2421_29_11 8614 9141 - ANTAR
TC HRGMv2_2421_29 HRGMv2_2421_29_12 9409 10182 - 3.A.1.17.8
TC HRGMv2_2421_29 HRGMv2_2421_29_13 10182 10934 - 3.A.1.17.8
pfam HRGMv2_2421_29 HRGMv2_2421_29_14 10937 11596 - TENA_THI-4
CAZyme HRGMv2_2421_29 HRGMv2_2421_29_15 11655 13175 - GH77
Gene ID: HRGMv2_2421_29_8
Type: TC
Location: 5414 - 6772 (+)
Gene ID: HRGMv2_2421_29_9
Type: pfam
Location: 6968 - 7516 (+)
Gene ID: HRGMv2_2421_29_10
Type: TC
Location: 7944 - 8465 (+)
Gene ID: HRGMv2_2421_29_11
Type: STP
Location: 8614 - 9141 (-)
Gene ID: HRGMv2_2421_29_12
Type: TC
Location: 9409 - 10182 (-)
Gene ID: HRGMv2_2421_29_13
Type: TC
Location: 10182 - 10934 (-)
Gene ID: HRGMv2_2421_29_14
Type: pfam
Location: 10937 - 11596 (-)
Gene ID: HRGMv2_2421_29_15
Type: CAZyme
Location: 11655 - 13175 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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