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Cluster: HRGMv2_2421_CGC8

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2421_21 HRGMv2_2421_21_17 15487 19608 - 9.B.34.1.2
STP HRGMv2_2421_21 HRGMv2_2421_21_18 19752 22286 - HATPase_c | HisKA | Response_reg | dCache_1
NULL(UNKNOWN) HRGMv2_2421_21 HRGMv2_2421_21_19 22273 22641 - NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_2421_21 HRGMv2_2421_21_20 22641 23729 - 8.A.59.4.2
STP HRGMv2_2421_21 HRGMv2_2421_21_21 23760 25589 - EAL
NULL(UNKNOWN) HRGMv2_2421_21 HRGMv2_2421_21_22 25604 26095 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_2421_21 HRGMv2_2421_21_23 26116 27519 - GT2 | GT2
Gene ID: HRGMv2_2421_21_17
Type: TC
Location: 15487 - 19608 (-)
Gene ID: HRGMv2_2421_21_18
Type: STP
Location: 19752 - 22286 (-)
Gene ID: HRGMv2_2421_21_19
Type:
Location: 22273 - 22641 (-)
Gene ID: HRGMv2_2421_21_20
Type: TC
Location: 22641 - 23729 (-)
Gene ID: HRGMv2_2421_21_21
Type: STP
Location: 23760 - 25589 (-)
Gene ID: HRGMv2_2421_21_22
Type:
Location: 25604 - 26095 (-)
Gene ID: HRGMv2_2421_21_23
Type: CAZyme
Location: 26116 - 27519 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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