Cluster: HRGMv2_2421_CGC7
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2421
- CGC Family ID: CGCFAM_10037
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2421_19 | HRGMv2_2421_19_3 | 2973 | 5105 | + | 4.A.1.1.9 |
| TF | HRGMv2_2421_19 | HRGMv2_2421_19_4 | 5883 | 6635 | + | GntR |
| CAZyme | HRGMv2_2421_19 | HRGMv2_2421_19_5 | 6758 | 10534 | - | CBM54 | SLH |
Gene ID: HRGMv2_2421_19_3
Type: TC
Location: 2973 - 5105 (+)
Type: TC
Location: 2973 - 5105 (+)
Gene ID: HRGMv2_2421_19_4
Type: TF
Location: 5883 - 6635 (+)
Type: TF
Location: 5883 - 6635 (+)
Gene ID: HRGMv2_2421_19_5
Type: CAZyme
Location: 6758 - 10534 (-)
Type: CAZyme
Location: 6758 - 10534 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Anaerotignaceae
Genus
Metalachnospira
Species
Metalachnospira gallinarum
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.