Cluster: HRGMv2_2421_CGC5
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2421
- CGC Family ID: CGCFAM_10077
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2421_12 | HRGMv2_2421_12_9 | 8332 | 9243 | + | 2.A.69.4.3 |
| pfam | HRGMv2_2421_12 | HRGMv2_2421_12_10 | 9266 | 9670 | + | DUF4430 |
| NULL(UNKNOWN) | HRGMv2_2421_12 | HRGMv2_2421_12_11 | 9667 | 10164 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_2421_12 | HRGMv2_2421_12_12 | 10494 | 12383 | - | CBM50 |
Gene ID: HRGMv2_2421_12_9
Type: TC
Location: 8332 - 9243 (+)
Type: TC
Location: 8332 - 9243 (+)
Gene ID: HRGMv2_2421_12_10
Type: pfam
Location: 9266 - 9670 (+)
Type: pfam
Location: 9266 - 9670 (+)
Gene ID: HRGMv2_2421_12_11
Type:
Location: 9667 - 10164 (+)
Type:
Location: 9667 - 10164 (+)
Gene ID: HRGMv2_2421_12_12
Type: CAZyme
Location: 10494 - 12383 (-)
Type: CAZyme
Location: 10494 - 12383 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Anaerotignaceae
Genus
Metalachnospira
Species
Metalachnospira gallinarum
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.