Cluster: HRGMv2_2421_CGC4
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2421
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2421_9 | HRGMv2_2421_9_38 | 39681 | 40964 | + | 9.A.40.2.4 |
| CAZyme | HRGMv2_2421_9 | HRGMv2_2421_9_39 | 41021 | 42532 | - | GT4 |
| pfam | HRGMv2_2421_9 | HRGMv2_2421_9_40 | 42808 | 43572 | - | Pan_kinase |
| pfam | HRGMv2_2421_9 | HRGMv2_2421_9_41 | 43569 | 44765 | - | Flavoprotein | DFP |
| TC | HRGMv2_2421_9 | HRGMv2_2421_9_42 | 45566 | 47776 | - | 3.A.11.3.1 |
Gene ID: HRGMv2_2421_9_38
Type: TC
Location: 39681 - 40964 (+)
Type: TC
Location: 39681 - 40964 (+)
Gene ID: HRGMv2_2421_9_39
Type: CAZyme
Location: 41021 - 42532 (-)
Type: CAZyme
Location: 41021 - 42532 (-)
Gene ID: HRGMv2_2421_9_40
Type: pfam
Location: 42808 - 43572 (-)
Type: pfam
Location: 42808 - 43572 (-)
Gene ID: HRGMv2_2421_9_41
Type: pfam
Location: 43569 - 44765 (-)
Type: pfam
Location: 43569 - 44765 (-)
Gene ID: HRGMv2_2421_9_42
Type: TC
Location: 45566 - 47776 (-)
Type: TC
Location: 45566 - 47776 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Anaerotignaceae
Genus
Metalachnospira
Species
Metalachnospira gallinarum
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.