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Cluster: HRGMv2_2417_CGC33

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_2417_144 HRGMv2_2417_144_1 3 920 - CBM48
TC HRGMv2_2417_144 HRGMv2_2417_144_2 1137 1616 + 3.D.1.5.1
TC HRGMv2_2417_144 HRGMv2_2417_144_3 1613 3487 + 3.D.1.5.1
STP HRGMv2_2417_144 HRGMv2_2417_144_4 3500 5188 + Fer4
TC HRGMv2_2417_144 HRGMv2_2417_144_5 5228 5815 - 3.A.1.147.2
Gene ID: HRGMv2_2417_144_1
Type: CAZyme
Location: 3 - 920 (-)
Gene ID: HRGMv2_2417_144_2
Type: TC
Location: 1137 - 1616 (+)
Gene ID: HRGMv2_2417_144_3
Type: TC
Location: 1613 - 3487 (+)
Gene ID: HRGMv2_2417_144_4
Type: STP
Location: 3500 - 5188 (+)
Gene ID: HRGMv2_2417_144_5
Type: TC
Location: 5228 - 5815 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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