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Cluster: HRGMv2_2417_CGC24

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2417_91 HRGMv2_2417_91_7 4735 5550 - 3.A.1.134.2
TC HRGMv2_2417_91 HRGMv2_2417_91_8 5540 6307 - 3.A.1.134.12
STP HRGMv2_2417_91 HRGMv2_2417_91_9 6408 7427 - HATPase_c
TF HRGMv2_2417_91 HRGMv2_2417_91_10 7424 8092 - Trans_reg_C
CAZyme HRGMv2_2417_91 HRGMv2_2417_91_11 8299 9744 - GT5
Gene ID: HRGMv2_2417_91_7
Type: TC
Location: 4735 - 5550 (-)
Gene ID: HRGMv2_2417_91_8
Type: TC
Location: 5540 - 6307 (-)
Gene ID: HRGMv2_2417_91_9
Type: STP
Location: 6408 - 7427 (-)
Gene ID: HRGMv2_2417_91_10
Type: TF
Location: 7424 - 8092 (-)
Gene ID: HRGMv2_2417_91_11
Type: CAZyme
Location: 8299 - 9744 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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