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Cluster: HRGMv2_2417_CGC20

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2417_58 HRGMv2_2417_58_3 1575 2273 + 3.A.1.132.6
NULL(UNKNOWN) HRGMv2_2417_58 HRGMv2_2417_58_4 2267 3133 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_2417_58 HRGMv2_2417_58_5 3371 5620 - GH31_3
TC HRGMv2_2417_58 HRGMv2_2417_58_6 5647 6321 - 9.B.28.1.2
CAZyme HRGMv2_2417_58 HRGMv2_2417_58_7 6342 8342 - GH31_4
CAZyme HRGMv2_2417_58 HRGMv2_2417_58_8 8435 10501 - GH31_5
TC HRGMv2_2417_58 HRGMv2_2417_58_9 10602 11474 - 3.A.1.1.18
TC HRGMv2_2417_58 HRGMv2_2417_58_10 11476 12369 - 3.A.1.1.20
Gene ID: HRGMv2_2417_58_3
Type: TC
Location: 1575 - 2273 (+)
Gene ID: HRGMv2_2417_58_4
Type:
Location: 2267 - 3133 (+)
Gene ID: HRGMv2_2417_58_5
Type: CAZyme
Location: 3371 - 5620 (-)
Gene ID: HRGMv2_2417_58_6
Type: TC
Location: 5647 - 6321 (-)
Gene ID: HRGMv2_2417_58_7
Type: CAZyme
Location: 6342 - 8342 (-)
Gene ID: HRGMv2_2417_58_8
Type: CAZyme
Location: 8435 - 10501 (-)
Gene ID: HRGMv2_2417_58_9
Type: TC
Location: 10602 - 11474 (-)
Gene ID: HRGMv2_2417_58_10
Type: TC
Location: 11476 - 12369 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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