Cluster: HRGMv2_2415_CGC8
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_2415
- CGC Family ID: CGCFAM_00946
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2415_14 | HRGMv2_2415_14_21 | 22026 | 23987 | + | 4.A.1.2.12 |
| CAZyme | HRGMv2_2415_14 | HRGMv2_2415_14_22 | 24003 | 25415 | + | GH32 |
| TF | HRGMv2_2415_14 | HRGMv2_2415_14_23 | 25512 | 26270 | - | GntR |
| TC | HRGMv2_2415_14 | HRGMv2_2415_14_24 | 26466 | 28451 | + | 4.A.1.2.13 |
| CAZyme | HRGMv2_2415_14 | HRGMv2_2415_14_25 | 28469 | 30115 | + | GH13_29 |
| STP | HRGMv2_2415_14 | HRGMv2_2415_14_26 | 30132 | 30389 | + | PTS-HPr |
| TC | HRGMv2_2415_14 | HRGMv2_2415_14_27 | 30433 | 32052 | + | 8.A.7.1.1 |
Gene ID: HRGMv2_2415_14_21
Type: TC
Location: 22026 - 23987 (+)
Type: TC
Location: 22026 - 23987 (+)
Gene ID: HRGMv2_2415_14_22
Type: CAZyme
Location: 24003 - 25415 (+)
Type: CAZyme
Location: 24003 - 25415 (+)
Gene ID: HRGMv2_2415_14_23
Type: TF
Location: 25512 - 26270 (-)
Type: TF
Location: 25512 - 26270 (-)
Gene ID: HRGMv2_2415_14_24
Type: TC
Location: 26466 - 28451 (+)
Type: TC
Location: 26466 - 28451 (+)
Gene ID: HRGMv2_2415_14_25
Type: CAZyme
Location: 28469 - 30115 (+)
Type: CAZyme
Location: 28469 - 30115 (+)
Gene ID: HRGMv2_2415_14_26
Type: STP
Location: 30132 - 30389 (+)
Type: STP
Location: 30132 - 30389 (+)
Gene ID: HRGMv2_2415_14_27
Type: TC
Location: 30433 - 32052 (+)
Type: TC
Location: 30433 - 32052 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Lachnoclostridium_B
Species
Lachnoclostridium_B stercoravium
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.