Cluster: HRGMv2_2415_CGC7
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2415
- CGC Family ID: CGCFAM_01394
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2415_5 | HRGMv2_2415_5_14 | 17843 | 18808 | - | 3.A.1.105.9 |
| pfam | HRGMv2_2415_5 | HRGMv2_2415_5_15 | 18941 | 20035 | + | HATPase_c | HisKA_3 |
| TF | HRGMv2_2415_5 | HRGMv2_2415_5_16 | 20032 | 20655 | + | GerE |
| CAZyme | HRGMv2_2415_5 | HRGMv2_2415_5_17 | 20716 | 21543 | + | CBM48 |
Gene ID: HRGMv2_2415_5_14
Type: TC
Location: 17843 - 18808 (-)
Type: TC
Location: 17843 - 18808 (-)
Gene ID: HRGMv2_2415_5_15
Type: pfam
Location: 18941 - 20035 (+)
Type: pfam
Location: 18941 - 20035 (+)
Gene ID: HRGMv2_2415_5_16
Type: TF
Location: 20032 - 20655 (+)
Type: TF
Location: 20032 - 20655 (+)
Gene ID: HRGMv2_2415_5_17
Type: CAZyme
Location: 20716 - 21543 (+)
Type: CAZyme
Location: 20716 - 21543 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Lachnoclostridium_B
Species
Lachnoclostridium_B stercoravium
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.