Cluster: HRGMv2_2415_CGC6
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_2415
- CGC Family ID: CGCFAM_04607
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2415_4 | HRGMv2_2415_4_1 | 3 | 1307 | + | GH13_11 |
| NULL(UNKNOWN) | HRGMv2_2415_4 | HRGMv2_2415_4_2 | 1381 | 2058 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| STP | HRGMv2_2415_4 | HRGMv2_2415_4_3 | 2471 | 3436 | - | PfkB |
| CAZyme | HRGMv2_2415_4 | HRGMv2_2415_4_4 | 3580 | 4911 | - | GH32 |
| TC | HRGMv2_2415_4 | HRGMv2_2415_4_5 | 4963 | 6066 | - | 3.A.1.1.27 |
| TC | HRGMv2_2415_4 | HRGMv2_2415_4_6 | 6073 | 6924 | - | 3.A.1.1.20 |
| TC | HRGMv2_2415_4 | HRGMv2_2415_4_7 | 6896 | 7795 | - | 3.A.1.1.20 |
Gene ID: HRGMv2_2415_4_1
Type: CAZyme
Location: 3 - 1307 (+)
Type: CAZyme
Location: 3 - 1307 (+)
Gene ID: HRGMv2_2415_4_2
Type:
Location: 1381 - 2058 (-)
Type:
Location: 1381 - 2058 (-)
Gene ID: HRGMv2_2415_4_3
Type: STP
Location: 2471 - 3436 (-)
Type: STP
Location: 2471 - 3436 (-)
Gene ID: HRGMv2_2415_4_4
Type: CAZyme
Location: 3580 - 4911 (-)
Type: CAZyme
Location: 3580 - 4911 (-)
Gene ID: HRGMv2_2415_4_5
Type: TC
Location: 4963 - 6066 (-)
Type: TC
Location: 4963 - 6066 (-)
Gene ID: HRGMv2_2415_4_6
Type: TC
Location: 6073 - 6924 (-)
Type: TC
Location: 6073 - 6924 (-)
Gene ID: HRGMv2_2415_4_7
Type: TC
Location: 6896 - 7795 (-)
Type: TC
Location: 6896 - 7795 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Lachnoclostridium_B
Species
Lachnoclostridium_B stercoravium
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.