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Cluster: HRGMv2_2415_CGC5

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_2415_3 HRGMv2_2415_3_98 96933 99176 - GH36
TF HRGMv2_2415_3 HRGMv2_2415_3_99 99286 100128 - HTH_AraC | HTH_AraC
NULL(UNKNOWN) HRGMv2_2415_3 HRGMv2_2415_3_100 100148 100318 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_2415_3 HRGMv2_2415_3_101 100393 103413 - GH2
NULL(UNKNOWN) HRGMv2_2415_3 HRGMv2_2415_3_102 103437 103541 - NULL(UNKNOWN)
[View Structural Homologs]
pfam HRGMv2_2415_3 HRGMv2_2415_3_103 103865 105034 + Nodulin-like | MFS_1
TC HRGMv2_2415_3 HRGMv2_2415_3_104 105031 105351 - 2.A.7.1.4
TC HRGMv2_2415_3 HRGMv2_2415_3_105 105607 106233 - 3.A.1.5.3
TC HRGMv2_2415_3 HRGMv2_2415_3_106 106230 107192 - 3.A.1.5.15
TC HRGMv2_2415_3 HRGMv2_2415_3_107 107207 108037 - 3.A.1.5.2
TC HRGMv2_2415_3 HRGMv2_2415_3_108 108034 109023 - 3.A.1.5.20
TC HRGMv2_2415_3 HRGMv2_2415_3_109 109073 110704 - 3.A.1.5.38
Gene ID: HRGMv2_2415_3_98
Type: CAZyme
Location: 96933 - 99176 (-)
Gene ID: HRGMv2_2415_3_99
Type: TF
Location: 99286 - 100128 (-)
Gene ID: HRGMv2_2415_3_100
Type:
Location: 100148 - 100318 (-)
Gene ID: HRGMv2_2415_3_101
Type: CAZyme
Location: 100393 - 103413 (-)
Gene ID: HRGMv2_2415_3_102
Type:
Location: 103437 - 103541 (-)
Gene ID: HRGMv2_2415_3_103
Type: pfam
Location: 103865 - 105034 (+)
Gene ID: HRGMv2_2415_3_104
Type: TC
Location: 105031 - 105351 (-)
Gene ID: HRGMv2_2415_3_105
Type: TC
Location: 105607 - 106233 (-)
Gene ID: HRGMv2_2415_3_106
Type: TC
Location: 106230 - 107192 (-)
Gene ID: HRGMv2_2415_3_107
Type: TC
Location: 107207 - 108037 (-)
Gene ID: HRGMv2_2415_3_108
Type: TC
Location: 108034 - 109023 (-)
Gene ID: HRGMv2_2415_3_109
Type: TC
Location: 109073 - 110704 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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