Cluster: HRGMv2_2415_CGC4
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_2415
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2415_3 | HRGMv2_2415_3_90 | 87831 | 89720 | - | GH13_4 |
| CAZyme | HRGMv2_2415_3 | HRGMv2_2415_3_91 | 89748 | 91931 | - | GH36 |
| TC | HRGMv2_2415_3 | HRGMv2_2415_3_92 | 92049 | 92894 | - | 3.A.1.1.28 |
| TC | HRGMv2_2415_3 | HRGMv2_2415_3_93 | 92894 | 93760 | - | 3.A.1.1.28 |
| TC | HRGMv2_2415_3 | HRGMv2_2415_3_94 | 93782 | 95071 | - | 3.A.1.1.28 |
Gene ID: HRGMv2_2415_3_90
Type: CAZyme
Location: 87831 - 89720 (-)
Type: CAZyme
Location: 87831 - 89720 (-)
Gene ID: HRGMv2_2415_3_91
Type: CAZyme
Location: 89748 - 91931 (-)
Type: CAZyme
Location: 89748 - 91931 (-)
Gene ID: HRGMv2_2415_3_92
Type: TC
Location: 92049 - 92894 (-)
Type: TC
Location: 92049 - 92894 (-)
Gene ID: HRGMv2_2415_3_93
Type: TC
Location: 92894 - 93760 (-)
Type: TC
Location: 92894 - 93760 (-)
Gene ID: HRGMv2_2415_3_94
Type: TC
Location: 93782 - 95071 (-)
Type: TC
Location: 93782 - 95071 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Lachnoclostridium_B
Species
Lachnoclostridium_B stercoravium
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.