dbCAN Logo

Cluster: HRGMv2_2415_CGC24

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_2415_71 HRGMv2_2415_71_44 42891 44636 - GH2
TC HRGMv2_2415_71 HRGMv2_2415_71_45 44923 45339 - 3.A.2.1.5
TC HRGMv2_2415_71 HRGMv2_2415_71_46 45396 46793 - 3.A.2.1.5
TC HRGMv2_2415_71 HRGMv2_2415_71_47 46805 47698 - 3.A.2.1.5
TC HRGMv2_2415_71 HRGMv2_2415_71_48 47711 49216 - 3.A.2.1.5
pfam HRGMv2_2415_71 HRGMv2_2415_71_49 49222 49758 - OSCP
pfam HRGMv2_2415_71 HRGMv2_2415_71_50 49736 50239 - ATP-synt_B
TC HRGMv2_2415_71 HRGMv2_2415_71_51 50295 50522 - 3.A.2.1.5
TC HRGMv2_2415_71 HRGMv2_2415_71_52 50569 51231 - 3.A.2.1.5
Gene ID: HRGMv2_2415_71_44
Type: CAZyme
Location: 42891 - 44636 (-)
Gene ID: HRGMv2_2415_71_45
Type: TC
Location: 44923 - 45339 (-)
Gene ID: HRGMv2_2415_71_46
Type: TC
Location: 45396 - 46793 (-)
Gene ID: HRGMv2_2415_71_47
Type: TC
Location: 46805 - 47698 (-)
Gene ID: HRGMv2_2415_71_48
Type: TC
Location: 47711 - 49216 (-)
Gene ID: HRGMv2_2415_71_49
Type: pfam
Location: 49222 - 49758 (-)
Gene ID: HRGMv2_2415_71_50
Type: pfam
Location: 49736 - 50239 (-)
Gene ID: HRGMv2_2415_71_51
Type: TC
Location: 50295 - 50522 (-)
Gene ID: HRGMv2_2415_71_52
Type: TC
Location: 50569 - 51231 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List