Cluster: HRGMv2_2415_CGC21
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2415
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2415_52 | HRGMv2_2415_52_79 | 85654 | 86892 | + | 1.A.11.1.4 |
| pfam | HRGMv2_2415_52 | HRGMv2_2415_52_80 | 86933 | 87292 | + | P-II |
| TC | HRGMv2_2415_52 | HRGMv2_2415_52_81 | 87409 | 88566 | + | 2.A.45.2.6 |
| CAZyme | HRGMv2_2415_52 | HRGMv2_2415_52_82 | 88664 | 91024 | + | GH2 |
| TC | HRGMv2_2415_52 | HRGMv2_2415_52_83 | 91040 | 92404 | + | 2.A.66.1.34 |
Gene ID: HRGMv2_2415_52_79
Type: TC
Location: 85654 - 86892 (+)
Type: TC
Location: 85654 - 86892 (+)
Gene ID: HRGMv2_2415_52_80
Type: pfam
Location: 86933 - 87292 (+)
Type: pfam
Location: 86933 - 87292 (+)
Gene ID: HRGMv2_2415_52_81
Type: TC
Location: 87409 - 88566 (+)
Type: TC
Location: 87409 - 88566 (+)
Gene ID: HRGMv2_2415_52_82
Type: CAZyme
Location: 88664 - 91024 (+)
Type: CAZyme
Location: 88664 - 91024 (+)
Gene ID: HRGMv2_2415_52_83
Type: TC
Location: 91040 - 92404 (+)
Type: TC
Location: 91040 - 92404 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Lachnoclostridium_B
Species
Lachnoclostridium_B stercoravium
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.